OncoLit: a multi-tenant oncology literature search, feed, and collaboration platform. Built with FastAPI + Vue 3 + PostgreSQL. Includes PubMed pipeline, drug approvals, AI summaries, and systematic review tools.
57 lines
1.5 KiB
YAML
57 lines
1.5 KiB
YAML
name: CI
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on:
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push:
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branches: [main, develop]
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pull_request:
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branches: [main]
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jobs:
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backend:
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runs-on: ubuntu-latest
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services:
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postgres:
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image: pgvector/pgvector:pg16
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env:
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POSTGRES_DB: scilit_test
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POSTGRES_USER: scilit
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POSTGRES_PASSWORD: test
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ports: ["5432:5432"]
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options: >-
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--health-cmd pg_isready --health-interval 10s --health-timeout 5s --health-retries 5
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-python@v5
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with: { python-version: "3.12" }
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- name: Install dependencies
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run: |
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cd backend
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pip install -e ".[dev]"
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- name: Lint (Ruff)
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run: |
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cd backend
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pip install ruff
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ruff check app/ tests/
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ruff format --check app/ tests/
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- name: Unit Tests
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run: |
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cd backend
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pytest tests/ -v --tb=short --color=yes --cov=app --cov-report=term-missing
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env:
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DATABASE_URL: postgresql+asyncpg://scilit:test@localhost:5432/scilit_test
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JWT_SECRET: ci-test-secret
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frontend:
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runs-on: ubuntu-latest
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steps:
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- uses: actions/checkout@v4
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- uses: actions/setup-node@v4
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with: { node-version: "20" }
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- name: Install
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run: cd frontend && npm ci
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- name: Type Check
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run: cd frontend && npx vue-tsc --noEmit
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- name: Build
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run: cd frontend && npm run build
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